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Publications

Aarssen, Lonnie W.; Tregenza, Tom; Budden, Amber E.; Lortie, Christopher J.; Koricheva, Julia; Leimu, Roosa. 2008. Bang for your buck: Rejection rates and impact factors in ecological journals. The Open Ecology Journal. Vol: 1. Pages 14-19. Project Page
Aberhan, Martin; Kiessling, Wolfgang; Fursich, Franz T. 2006. Testing the role of biological interactions for the evolution in mid-Mesozoic marine benthic ecosystems. Paleobiology. Vol: 32(2). Pages 259-277. Project Page
Abrams, Peter A. 1999. The adaptive dynamics of consumer choice. American Naturalist. Vol: 153. Pages 83-97. Project Page
Abrams, Peter A. 2000. Character shifts of prey species that share predators. American Naturalist. Vol: 156. Pages S45-S61. Project Page
Abrams, Peter A. 2001. The effect of density-independent mortality on the coexistence of exploitative competitors for renewing resources. American Naturalist. Vol: 158. Pages 459-470. Project Page
Abrams, Peter A. 2004. When does periodic variation in resource growth allow robust coexistence of competing consumer species?. Ecology. Vol: 85. Pages 372-382. Project Page
Abrams, Peter A. 2007. Defining and measuring the impact of dynamic traits on interspecific interactions. Ecology. Vol: 88(10). Pages 2555-2562. Project Page
Abrams, Peter A. 2007. Habitat choice in predator-prey systems: Spatial instability due to interacting adaptive movements. The American Naturalist. Vol: 169(5). Pages 581-594. Project Page
Abrams, Peter A. 2008. Measuring the impact of dynamic antipredator traits on predator-prey-resource interactions. Ecology. Vol: 89(6). Pages 1640-1649. Project Page
Abrams, Peter A. In-press. Measuring the population-level consequences of predator-induced prey movement. Evolutionary Ecology Research. Project Page
Abrams, Peter A. In-press. The use of predator-cue experiments to quantify behavioral effects in tri-trophic systems: A theoretical analysis. Ecology. Project Page
Abrams, Peter A.; Chen, Xin. 2002. The evolution of traits affecting resource acquisition and predator vulnerability: Character displacement under real and apparent competition. American Naturalist. Vol: 160. Pages 692-704. Project Page
Abrams, Peter A.; Wilson, Will G. 2004. Coexistence of competitors in metacommunities due to spatial variation in resource growth rates: Does R* predict the outcome of competition?. Ecology Letters. Vol: 7. Pages 929-940. Project Page
Abramson, Sarah. 2004. Classroom volunteers inspire young ecologists. Nature. Vol: 431. Pages 125. (Abstract) Project Page
Adair, Carol; Parton, William J.; Del Grosso, Stephen; Silver, Whendee L.; Harmon, Mark; Hall, Sonia A.; Burke, Ingrid C.; Hart, Stephen C. 2008. Simple three pool model accurately describes patterns of long-term litter decomposition in diverse climates. Global Change Biology. Vol: 14. Pages 2636-2660. Project Page
Adler, Fred; Muller-Landau, Helene C. 2005. When do localized natural enemies increase species richness?. Ecology Letters. Vol: 8. Pages 438-447. Project Page
Adler, Peter B.; Hille Ris Lambers, Janneke; Kyriakidis, Phaedon; Guan, Qingfeng; Levine, Jonathan M. 2006. Climate variability has a stabilizing effect on the coexistence of prairie grasses. Proceedings of the National Academy of Sciences. Vol: 103(34). Pages 12793-12798. Project Page
Adler, Peter B.; Hille Ris Lambers, Janneke; Levine, Jonathan M. 2007. A niche for neutrality. Ecology Letters. Vol: 10. Pages 95-104. Project Page
Adler, Peter B.; Levine, Jonathan M. 2007. Contrasting relationships between precipitation and species richness in space and time. Oikos. Vol: 116. Pages 221-232. Project Page
Adler, Peter B.; Tyburczy, Will; Lauenroth, William. 2007. Long-term mapped quadrats from Kansas prairie: A unique source of demographic information for herbaceous plants. Ecology. Vol: 88. Pages 2673. Project Page
Agapow, Paul-Michael; Bininda-Emonds, Olaf R. P.; Crandall, Keith A.; Gittleman, John L.; Mace, Georgina; Marshall, Jonathon G.; Purvis, Andy. 2004. The impact of species concept on biodiversity studies. Quarterly Review of Biology. Vol: 79(2). Pages 161-179. Project Page
Aguirre, A. A.; Ostfeld, Richard S.; House, C. A.; Tabor, Gary; Pearl, M. 2002. Conservation Medicine: Ecological Health in Practice. Oxford University Press. New York. Project Page
Airame, Satie; Dugan, Jenifer E.; Lafferty, Kevin; Leslie, Heather M.; McArdle, Deborah; Warner, Robert R. 2003. Applying ecological criteria to marine reserve design: A case study from the California Channel Islands. Ecological Applications (Supplement: The Science of Marine Reserves). Vol: 13(1). Pages S170-S184. Project Page
Aizen, Marcelo A.; Garibaldi, Lucas A.; Cunningham, Saul; Klein, Alexandra-Maria. 2008. Long-term global trends in crop yield and production reveal no current pollination shortage but increasing pollinator dependency. Current Biology. Vol: 18. Pages 1572-1575. Project Page
Aizen, Marcelo A.; Harder, L. D. 2007. Expanding the limits of the pollen-limitation concept: Effects of pollen quantity and quality. Ecology. Vol: 88(2). Pages 271-281. Project Page
Aizen, Marcelo A.; Vazquez, Diego P. 2006. Flower performance in human-altered habitats. Edited by Harder, LD.; Barrett, SCH. The Ecology and Evolution of Flowers. Oxford University Press. Pages 159-179. Project Page
Aizen, Marcelo A.; Vazquez, Diego P. 2006. Flowering phenologies of hummingbird plants from the temperate forest of southern South America: is there evidence of competitive displacement?. Ecography . Vol: 29. Pages 357-366. Project Page
Akcakaya, H. Resit; Regan, Helen M. 2001. Population models: Metapopulations. Edited by Pastorok, R. A.; Bartell, S. M.; Ferson, S.; Ginzburg, L. R.. Ecological Modeling in Risk Assessment: Chemical Effects on Populations, Ecosystems and Landscapes. Lewis Publishers. Boca Raton, FL. Pages 83-95. Project Page
Alcamo, J.; Leemans, Rik; Kreileman, E. 1998. Global Change Scenarios of the 21st Century: Results from the IMAGE 2.1 Model. Elsevier. Oxford. Project Page
Alexander, Richard B.; Johnes, Penny; Boyer, Elizabeth W.; Smith, Richard A. 2002. A comparison of models for estimating the riverine export of nitrogen from large watersheds. Biogeochemistry. Vol: 57&58. Pages 295-339. Project Page
Allen, Andrew P.; Gillooly, James F. 2006. Assessing latitudinal gradients in speciation rates and biodiversity at the global scale. Ecology Letters. Vol: 9. Pages 947-954. Project Page
Allen, Andrew P.; Gillooly, James F. 2007. The mechanistic basis of the metabolic theory of ecology. Oikos. Vol: 116. Pages 1073-1077. Project Page
Allen, Andrew P.; Gillooly, James F.; Brown, James H. 2005. Linking the global carbon cycle to individual metabolism. Functional Ecology. Vol: 19. Pages 202-213. Project Page
Allen, Andrew P.; Gillooly, James F.; Savage, Van M.; Brown, James H. 2006. Kinetic effects of temperature on rates of genetic divergence and speciation. Proceedings of the National Academy of Sciences. Vol: 130(24). Pages 9130-9135. Project Page
Allen, Andrew P.; Savage, Van M. 2007. Setting the absolute tempo of biodiversity dynamics. Ecology Letters. Vol: 10. Pages 637-646. Project Page
Allen, Craig R.; Garmestani, A. S.; Havlicek, Tanya; Marquet, Pablo A.; Peterson, Garry; Restrepo, Carla; Stow, Craig; Weeks, B. E. 2006. Patterns in body mass distributions: Sifting among alternative hypotheses. Ecology Letters. Vol: 9. Pages 630-643. Project Page
Allen, Craig R.; Holling, Crawford S. 2002. Cross-scale structure and scale breaks in ecosystems and other complex systems. Ecosystems (Special feature on Discontinuous Structure in Ecological Systems). Vol: 5(4). Pages 315-318. Project Page
Allen, Craig R.; Saunders, Denis A. 2002. Variability between scales: Predictors of nomadism in birds of an Australian Mediterranean-climate ecosystem. Ecosystems (Special feature on Discontinuous Structure in Ecological Systems). Vol: 5(4). Pages 348-359. Project Page
Allen, Edith B.; Covington, W. W.; Falk, Donald A. 1996. National Science Foundation workshop supports restoration-related research. Restoration and Management Notes. Vol: 14. Pages 148-150. Project Page
Allen, Edith B.; Covington, W. W.; Falk, Donald A. 1997. Developing the conceptual basis for restoration ecology. Restoration Ecology. Vol: 5. Pages 275-276. Project Page
Allesina, Stefano; Alonso, David; Pascual, Mercedes. 2008. A general model for food web structure. Science. Vol: 320. Pages 658-661. Project Page
Allesina, Stefano; Pascual, Mercedes. 2008. Network structure, predator?prey modules, and stability in large food webs. Theoretical Ecology. Vol: 1. Pages 55-64. Project Page
Allesina, Stefano; Pascual, Mercedes. 2009. Food web models: A plea for groups. Ecology Letters. Vol: 12(7). Pages 652-662. Project Page
Allesina, Stefano; Pascual, Mercedes. 2009. Googling food webs: Can an eigenvector measure species' importance for coextinctions?. PLoS Computational Biology. Vol: 5(9). Pages 1-6. Project Page
Allison, Gary; Gaines, Steven D.; Lubchenco, Jane; Possingham, Hugh P. 2003. Ensuring persistence of marine reserves: Catastrophes require adopting an insurance factor. Ecological Applications (Supplement: The Science of Marine Reserves). Vol: 13(1). Pages S8-S24. Project Page
Alonso, David; Ostling, Annette; Etienne, Rampal S. 2008. The implicit assumption of symmetry and the species abundance distribution. Ecology Letters. Vol: 11. Pages 93-105. Project Page
Alroy, John. 1999. Putting North America's end-Pleistocene megafaunal extinction in context: Large scale analysis of spatial patterns, extinction rates, and size distributions. Edited by MacPhee, Ross D. E.; Sues, Hans-Dieter. Extinctions in Near Time: Causes, Contexts, and Consequences. Plenum. New York. Pages 105-143. Project Page
Alroy, John. 1999. The fossil record of North American mammals: Evidence for a Paleocene evolutionary radiation. Systematic Biology. Vol: 48. Pages 107-118. Project Page
Alroy, John. 2000. New methods for quantifying macroevolutionary patterns and processes. Paleobiology. Vol: 26(4). Pages 707-733. Project Page
Alroy, John. 2000. Successive approximations of diversity curves: Ten more years in the library. Geology. Vol: 28. Pages 1023-1026. Project Page
Alroy, John. 2000. Understanding the dynamics of trends within evolving lineages. Paleobiology. Vol: 26(3). Pages 319-329. Project Page
Alroy, John. 2001. A multispecies overkill simulation of the end-Pleistocene megafaunal mass extinction. Science. Vol: 292. Pages 1893-1896. Project Page
Alroy, John. 2001. Did human hunting cause mass extinction? Response. Science. Vol: 294(5546). Pages 1461-1462. Project Page
Alroy, John. 2002. How many named species are valid?. Proceedings of the National Academy of Sciences. Vol: 99. Pages 3706-3711. Project Page
Alroy, John. 2002. Stratigraphy in phylogeny reconstruction - reply to Smith (2000). Journal of Paleontology. Vol: 76. Pages 587-589. Project Page
Alroy, John. 2003. Cenozoic bolide impacts and biotic change in North American mammals. Astrobiology. Vol: 3. Pages 119-132. Project Page
Alroy, John. 2003. Global databases will yield reliable measures of global biodiversity. Paleobiology. Vol: 29(1). Pages 26-29. Project Page
Alroy, John. 2003. Taxonomic inflation and body mass distributions in North American fossil mammals. Journal of Mammalogy. Vol: 84(2). Pages 431-443. Project Page
Alroy, John. 2004. Are Sepkoski's evolutionary faunas dynamically coherent?. Evolutionary Ecology Research. Vol: 6. Pages 1-32. Project Page
Alroy, John. 2008. Dynamics of origination and extinction in the marine fossil record. Proceedings of the National Academy of Sciences. Vol: 105(suppl.1). Pages 11536-11542. Project Page
Alroy, John. 2009. Speciation and extinction in the fossil record of North American mammals. Edited by Butlin, R.;Bridle, J.; Schluter, D.. Speciation and Patterns of Diversity. Cambridge University Press. Cambridge. Pages 301-323. Project Page
Alroy, John; Aberhan, Martin; Bottjer, David J.; Foote, Michael; Fursich, Franz T.; Harries, Peter J.; Hendy, Austin J.W.; Holland, Steven M.; Ivany, Linda C.; Kiessling, Wolfgang; Kosnik, Matthew A.; Marshall, Charles R.; McGowan, Alistair J.; Miller, Arnold I.; Olszewski, Tom; Patzkowsky, Mark E.; Peters, Shanan E.; Villier, L.; Wagner, Peter J.; Bonuso, Nicole; Borkow, Philip S.; Brenneis, Benjamin; Clapham, Matthew E.; Fall, Leigh M.; Ferguson, Chad A.; Hanson, Victoria L.; Krug, Andrew Zack; Layou, Karen M.; Leckey, Erin; Nurnberg, Sabine; Powers, Catherine M.; Sessa, Jocelyn A.; Simpson, Carl; Tomasovych, Adam; Visaggi, Christy C. 2008. Phanerozoic trends in the global diversity of marine invertebrates. Science. Vol: 321. Pages 97-100. Project Page
Alroy, John; Koch, P. L.; Zachos, J.C. 2000. Global climate change and North American mammalian evolution. The Paleontological Society. Pages 259-288. Project Page
Alroy, John; Koch, P. L.; Zachos, J.C. 2001. Global climate change and North American mammalian evolution. Edited by Wing, Scott L.; Erwin, Douglas H.. Deep Time: Paleobiology's Perspective. University of Chicago Press. Chicago. Pages 259-288. Project Page
Alroy, John; Marshall, Charles R.; Bambach, Richard K.; Bezusko, Karen; Foote, Michael; Fursich, Franz T.; Hansen, Thor A.; Holland, Steven M.; Ivany, Linda C.; Jablonski, David; Jacobs, David; ,; Kosnik, Matthew A.; Lidgard, Scott; Low, Sofy; Miller, Arnold I.; Novack-Gottshall, P.M.; Olszewski, Tom; Patzkowsky, Mark E.; Raup, David; Roy, Kaustuv; Sepkoski, J. John; Sommers, Michael; Wagner, Peter J.; Webber, Andrew J. 2001. Effects of sampling standardization on estimates of Phanerozoic marine diversification. Proceedings of the National Academy of Sciences. Vol: 98. Pages 6261-6266. (Abstract) Project Page
Altintas, Ilkay; Berkley, Chad; Jaeger, Efrat; Jones, Matthew B.; Ludaescher, Bertram; Mock, S. 2004. Kepler: An extensible system for design and execution of scientific workflows. Proceedings of the 16th International Conference on Scientific and Statistical Database Management. IEEE Computer Society. Washington D.C.. Pages 423. Project Page
Altintas, Ilkay; Berkley, Chad; Jaeger, Efrat; Jones, Matthew B.; Ludaescher, Bertram; Mock, S. 2004. Kepler: Towards a grid enabled system for scientific workflows. Workshop on Workflow in Grid Systems, GlobalGrid Forum (GGF10). Berlin, Germany. Project Page
Altintas, Ilkay; Bhagwanani, S.; Butler, D.; Chandra, S.; Cheng, Z.; Coleman, M.; Critchlow, T.; Gupta, A.; Han, W.; Liu, L.; Ludaescher, Bertram; Pu, C.; Moore, Reagan; Shoshani, A.; Vouk, M. 2003. A modeling and execution environment for distributed scientific workflows. 15th International Conference on Scientific and Statistical Database Management (SSDBM). Boston, Massachusetts. Pages 1-4. Project Page
Altintas, Ilkay; Birnbaum, A.; Baldridge, K.; Sudholt, W.; Miller, Mike; Amoreira, C.; Potier, Y.; Ludaescher, Bertram. 2005. A framework for the design and reuse of grid workflows. Scientific Applications on Grid Computing (SAG'04). Vol: 3458. Springer Berlin / Heidelberg. Springer. Pages 120-123. Project Page
Altintas, Ilkay; Jaeger, Efrat; Lin, Kuo-chuan; Ludaescher, Bertram; Memon, A. 2004. A web service composition and deployment framework for scientific workflows [abstract]. 2nd Intl. Conference on Web Services (ICWS). San Diego, California. Pages 814-815. Project Page
Altizer, Sonia; Harvell, Drew; Friedle, Elizabeth. 2003. Rapid evolutionary dynamics and disease threats to biodiversity. Trends in Ecology and Evolution. Vol: 18(11). Pages 589-596. (Abstract) Project Page
Altizer, Sonia; Nunn, Charles L.; Thrall, Peter; Gittleman, John L.; Antonovics, Janis; Cunningham, Andrew A.; Dobson, Andrew P.; Ezenwa, Vanessa; Jones, Kate E.; Pedersen, Amy B.; Poss, Mary; Pulliam, Juliet. 2003. Social organization and parasite risk in mammals: Integrating theory and empirical studies. Annual Review of Ecology, Evolution, and Systematics. Vol: 34. Pages 517-547. (Abstract) Project Page
Amarasekare, Priyanga. 2000. Coexistence of competing parasitoids on a patchily distributed host: Local vs. spatial mechanisms. Ecology. Vol: 81. Pages 1286-1296. Project Page
Amarasekare, Priyanga. 2000. Spatial dynamics in a host-multiparasitoid community. Journal of Animal Ecology. Vol: 69. Pages 201-213. Project Page
Amarasekare, Priyanga. 2000. The geometry of coexistence. Biological Journal of the Linnean Society. Vol: 71. Pages 1-31. Project Page
Amarasekare, Priyanga; Hoopes, Martha F.; Mouquet, Nicolas; Holyoak, Marcel. 2004. Mechanisms of coexistence in competitive metacommunities. American Naturalist. Vol: 164. Pages 310-326. Project Page
Amarasekare, Priyanga; Nisbet, Roger M. 2001. Spatial heterogeneity, source-sink dynamics, and the local coexistence of competing species. American Naturalist. Vol: 158. Pages 572-584. Project Page
Amarasekare, Priyanga; Possingham, Hugh P. 2001. Patch dynamics and metapopulation theory: The case of successional species. Journal of Theoretical Biology. Vol: 209. Pages 333-344. Project Page
Andelman, Sandy J.; Bowles, Christy; Willig, Michael R.; Waide, Robert B. 2004. Understanding environmental complexity through a distributed knowledge network. BioScience. Vol: 54(3). Pages 240-246. Project Page
Andelman, Sandy J.; Fagan, William F. 2000. Umbrellas and flagships: Efficient conservation surrogates or expensive mistakes?. Proceedings of the National Academy of Sciences. Vol: 97. Pages 5954-5959. Project Page
Andelman, Sandy J.; Groves, Craig; Regan, Helen M. 2004. A review of protocols for selecting species at risk in the context of US Forest Service viability assessments. Acta Oecologica. Vol: 26. Pages 75-83. Project Page
Andelman, Sandy J.; Willig, Michael R. 2002. Alternative configurations of conservation reserves for Paraguayan bats: Considerations of spatial scale. Conservation Biology. Vol: 16. Pages 1352-1363. Project Page
Andelman, Sandy J.; Willig, Michael R. 2003. Present patterns and future prospects for biodiversity in the Western Hemisphere. Ecology Letters. Vol: 6. Pages 818-824. Project Page
Andelman, Sandy J.; Willig, Michael R. 2004. Networks by design: A revolution in ecology. Science. Vol: 305. Pages 1565-1567. Project Page
Anderson, Kristina J.; Allen, Andrew P.; Gillooly, James F.; Brown, James H. 2006. Temperature-dependence of biomass accumulation rates during secondary succession. Ecology Letters. Vol: 9. Pages 673-682. Project Page
Anderson, Robert P.; Lew, D.; Peterson, A. Townsend. 2003. Evaluating predictive models of species' distributions: Criteria for selecting optimal models. Ecological Modelling. Vol: 162. Pages 211-232. Project Page
Andrews, Peter; Armour-Chelu, M. 1998. Taphonomic observations on a surface bone assemblage in a temperate environment. Bulletin of the Geological Society of France. Vol: 169. Pages 433-442. Project Page
Andrews, Peter; Cook, J.; Currant, A.; Stringer, C. 1999. Westbury Cave: The Natural History Museum excavations 1976-1984. Western Academic and Specialist Press. Bristol. Project Page
Antonovics, Janis; Thrall, Peter; Jarosz, Andrew M. 1997. Genetics and the spatial ecology of species interactions. Edited by Tilman, David; Kareiva, Peter. Spatial Ecology: The Role of Space in Population Dynamics and Interspecific Interactions. Princeton University Press. Princeton. Pages 158-180. Project Page
Arim, Matias; Abades, Sebastian R.; Neill, Paula; Lima, Mauricio; Marquet, Pablo A. 2006. Spread dynamics of invasive species. Proceedings of the National Academy of Sciences. Vol: 103. Pages 374-378. Project Page
Arim, Matias; Bozinovic, F.; Marquet, Pablo A. 2007. On the relationship between trophic position, body mass and temperature: reformulating the energy limitation hypothesis. Oikos. Vol: 116. Pages 1524-1530. Project Page
Armada, Nygiel B.; White, Alan T.; Christie, Patrick J. 2009. Managing fisheries resources in Danajon Bank, Bohol, Philippines: An ecosystem-based approach . Coastal Management. Vol: 37(3-4). Pages 308 - 330. Project Page
Armsworth, Paul R.; Kendall, Bruce E.; Davis, Frank W. 2004. An introduction to biodiversity concepts for environmental economists. Resource and Energy Economics (Special issue on the economics of biodiversity). Vol: 26(2). Pages 115-136. Project Page
Armsworth, Paul R.; Roughgarden, Joan. 2001. An invitation to ecological economics. Trends in Ecology and Evolution. Vol: 16. Pages 229-234. Project Page
Arneberg, Per. 2001. An ecological law and its macroecological consequences as revealed by studies of relationships between host densities and parasite prevalence. Ecography. Vol: 24. Pages 352-358. Project Page
Arneberg, Per. 2002. Host population density and body mass as determinants of species richness in parasite communities: Comparative analyses of directly transmitted nematodes of mammals. Ecography. Vol: 25. Pages 88-94. Project Page
Ashley, Mary V.; Wilk, J. A.; Styan, S. M.; Craft, K. J.; Jones, Kate E.; Feldheim, K. A.; Lewers, K. S.; Ashman, Tia-Lynn. 2003. High variability and disomic segregation of microsatellites in the octaploid Fragaria virginiana Mill (Rosaceae). Theoretical and Applied Genetics. Vol: 107(7). Pages 1201-1207. (Abstract) Project Page
Ashley, Mary V.; Willson, Mary F.; Pergams, Oliver R.W.; O'Dowd, Dennis J.; Gende, Scott M.; Brown, Joel. 2003. Evolutionarily enlightened management. Biological Conservation. Vol: 111. Pages 115-123. (Abstract) Project Page
Ashman, Tia-Lynn; Knight, Tiffany M.; Steets, Janette A.; Amarasekare, Priyanga; Burd, Martin; Campbell, Diane; Dudash, Michele R.; Johnston, Mark O.; Mazer, Susan J.; Mitchell, Randall; Morgan, Martin; Wilson, Will G. 2004. Pollen limitation of plant reproduction: Ecological and evolutionary causes and consequences. Ecology. Vol: 85(9). Pages 2408-2421. Project Page
Ashman, Tia-Lynn; Morgan, Martin. 2004. Explaining phenotypic selection on plant attractive characters: Male function, gender balance or ecological context?. Proceedings of the Royal Society B: Biological Sciences. Vol: 271(1539). Pages 553-559. Project Page
Athanasiadis, I.; Villa, Ferdinando; Rizzoli, Andrea M. 2007. Enabling knowledge-based software engineering through semantic object-relational mappings. 4th European Semantic Web Conference 2007. Project Page
Athanasiadis, I.; Villa, Ferdinando; Rizzoli, Andrea M. 2007. Ontologies, javabeans and relational databases for enabling semantic linking. IEEE Workshop on Development and Application of Knowledge Based Software Engineering Tools (KASET) 2007. Project Page
Austerlitz, Frederic; Dick, Christopher W.; Dutech, Cyril; Klein, Estienne K.; Oddou-Muratorio, Sylvie; Smouse, Peter; Sork, Victoria L. 2004. Using genetic markers to estimate the pollen dispersal curve. Molecular Ecology. Vol: 13. Pages 937-954. Project Page
Badano, Ernesto I.; Marquet, Pablo A. 2008. Ecosystem engineering affects ecosystem functioning in high-Andean landscapes. Oecologia. Vol: 155. Pages 821-829. Project Page
Badano, Ernesto I.; Villarroel, Elisa; Bustamante, Ramiro O.; Marquet, Pablo A.; Cavieres, Lohengrin. 2007. Ecosystem engineering facilitates invasions by exotic plants in high-Andean ecosystems. Journal of Ecology. Vol: 95. Pages 682-688. Project Page
Baillie, Jonathan; Bennun, L.; Brooks, Thomas; Butchart, S.H. M.; Chanson, Janice S.; Cokeliss, Zoe; Hilton-Taylor, Craig; Hoffmann, Michael; Mace, Georgina; Mainka, S. A.; Pollock, Caroline M.; Rodrigues, Ana S. L.; Stattersfield, Ali; Stuart, Simon. 2004. A Global Species Assessment. IUCN - The World Conservation Union. Gland, Switzerland. Project Page
Baker, Karen S.; Pennington, Deana D.; Porter, John H. 2006. Multiple approaches to semantic issues: Vocabularies, dictionaries and ontologies. Databits, a publication of the Long Term Ecological Research (LTER) Network. Pages 1. Project Page
Baldocchi, Dennis; Kelliher, Francis M.; Black, T. A.; Jarvis, P. 2000. Climate and vegetation controls on boreal zone energy exchange. Global Change Biology. Vol: 6(S1). Pages 69-83. Project Page
Balmin, A.; Papakonstantinou, Y.; Vianu, Victor. 2004. Incremental validation of xml documents. Special issue of ACM Transactions on Database Systems (TODS). Vol: 29(4). Pages 710-751. Project Page
Balser, Teri; Kinzig, Ann P.; Firestone, Mary. 2002. Linking soil microbial communities and ecosystem functioning. Edited by Kinzig, A.; Pacala, S.; Tilman, D.. Functional Consequences of Biodiversity: Empirical Progress and Theoretical Extensions. Princeton University Press. Princeton. Pages 265-293. Project Page
Barbier, Edward B.; Koch, Evamaria W.; Silliman, Brian R.; Hacker, Sally; Wolanski, Eric; Primavera, Jurgenne; Granek, Elise; Polansky, Stephen; Aswani, Shankar; Cramer, Lori A.; Stoms, David M.; Kennedy, Chris J.; Bael, David; Kappel, Carrie V.; Perillo, Gerardo; Reed, Denise J. 2008. Vegetation's role in coastal protection - Response. Science. Vol: 320. Pages 177. Project Page
Barbier, Edward B.; Koch, Evamaria W.; Silliman, Brian R.; Hacker, Sally; Wolanski, Eric; Primavera, Jurgenne; Granek, Elise; Polasky, Stephen; Aswani, Shankar; Cramer, Lori A.; Stoms, David M.; Kennedy, Christopher; Bael, David; Kappel, Carrie V.; Perillo, Gerardo; Reed, Denise J. 2008. Coastal ecosystem-based management with nonlinear ecological functions and values. Science. Vol: 319. Pages 321-323. (Online version)Project Page
Barrowman, Nicolas J; Myers, Ransom A.; Hilborn, Ray; Field, Chris A. 2003. The variability among populations of coho salmon in the maximum reproductive rate and depensation. Ecological Applications. Vol: 13(3). Pages 784-793. Project Page
Barseghian, Derik; Altintas, Ilkay; Jones, Matthew B. 2008. Accessing and using sensor data within the Kepler scientific workflow system. Edited by Gries C., Jones M.B. Proceedings of Environmental Information Management Conference 2008. Pages 26-32. Project Page
Bartell, S. M.; Pastorok, R. A.; Akcakaya, H. Resit; Regan, Helen M.; Ferson, Scott; Mackay, C. 2003. Realism and relevance of ecological models used in chemical risk assessment. Human and Ecological Risk Assessment. Vol: 9. Pages 907-938. Project Page
Barton, A. D.; Greene, Charles H.; Monger, Bruce; Pershing, Andrew J. 2003. The Continuous Plankton Recorder survey and the North Atlantic Oscillation: Interannual- to multidecadal-scale patterns of phytoplankton variability in the North Atlantic Ocean. Progress in Oceanography. Vol: 58(2). Pages 337-358. Project Page
Bascompte, Jordi. 2001. Aggregate statistical measures and metapopulation dynamics. Journal of Theoretical Biology. Vol: 209. Pages 373-379. Project Page
Bascompte, Jordi; Melian, Carlos J.; Sala, Enric. 2005. Interaction strength combinations and the overfishing of a marine food web. Proceedings of the National Academy of Sciences. Vol: 102(15). Pages 5443-5447. Project Page
Bascompte, Jordi; Possingham, Hugh P.; Roughgarden, Joan. 2002. Patchy populations in stochastic environments: Critical number of patches for persistence. American Naturalist. Vol: 159(2). Pages 128-137. Project Page
Bascompte, Jordi; Rodriguez, Miguel A. 2000. Self-disturbance as a source of spatiotemporal heterogeneity: The case of the tallgrass prairie. Journal of Theoretical Biology. Vol: 204. Pages 153-164. Project Page
Bascompte, Jordi; Rodriguez, Miguel A. 2001. Habitat patchiness and plant species richness. Ecology Letters. Vol: 4. Pages 417-420. Project Page
Bascompte, Jordi; Sole, Ricard V. 1998. Effects of habitat destruction in a prey-predator metapopulation model. Journal of Theoretical Biology. Vol: 195. Pages 383-393. Project Page
Bascompte, Jordi; Sole, Ricard V. 1998. Spatiotemporal patterns in nature. Trends in Ecology and Evolution. Vol: 13. Pages 173-174. Project Page
Bashkin, Vladimir; Park, S. U.; Choi, M. S.; Less, C. B. 2002. Nitrogen budgets for the Republic of Korea and the Yellow Sea region. Biogeochemistry. Vol: 57&58. Pages 387-403. Project Page
Baskett, Marissa. 2007. Simple fisheries and marine reserve models of interacting species: An overview and example with recruitment facilitation. CalCOFI Reports. Vol: 48. Pages 71-81. Project Page
Baskett, Marissa; Gaines, Steven D.; Nisbet, Roger M. 2009. Symbiont diversity may help coral reefs survive moderate climate change. Ecological Applications. Vol: 19(1). Pages 3?17. Project Page
Baskett, Marissa; Halpern, Benjamin S. In press. Marine Ecosystem Services. Edited by Levin, S.A.. Guide to Ecology. Princeton University Press. Princeton, NJ. Project Page
Baskett, Marissa; Micheli, Fiorenza; Levin, Simon A. 2007. Designing marine reserves for interacting species: Insights from theory. Biological Conservation. Vol: 137(2). Pages 163-179. Project Page
Baskett, Marissa; Nisbet, Roger M.; Kappel, Carrie V.; Mumby, Peter J.; Gaines, Steven D. 2009. Conservation management approaches to protecting the capacity for corals to respond to climate change: A theoretical comparison. Global Change Biology. Project Page
Baskett, Marissa; Yoklavich, Mary; Love, Milton S. 2006. Predation, competition, and the recovery of overexploited fish stocks in marine reserves. Canadian Journal of Fisheries and Aquatic Sciences. Vol: 63(6). Pages 1214-1229. Project Page
Bastviken, David; Cole, Jonathan J.; Pace, Michael L.; Tranvik, Lars. 2004. Methane emissions from lakes: Dependence of lake characteristics, two regional assessments, and a global estimate. Global Biogeochemical Cycles. Vol: 18. Pages doi:10.1029/2004GB002238. Project Page
Becerra, Judith X. 2003. Evolution of Mexican Bursera (Burseraceae) inferred from ITS, ETS, and 5S nuclear ribosomal DNA sequences. Molecular Phylogenetics and Evolution. Vol: 26. Pages 300-309. (Abstract) Project Page
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Pascual, Mercedes; Dobson, Andrew P. 2005. Seasonal patterns of infectious diseases. Public Library of Science Medicine. Vol: 2(1). Pages 18-20. Project Page
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Pennington, Deana D. 2005. Cyberinfrastructure for grassland biodiversity studies. The Network News, a publication of the Long Term Ecological Research (LTER) Network. Project Page
Pennington, Deana D. 2006. Navigating semantic approaches: From keywords to ontologies. Databits, a publication of the Long Term Ecological Research (LTER) Network. Project Page
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Pennington, Deana D. 2007. Cross-disciplinary collaboration and learning. Ecology and Society. Vol: 13(2). Pages 8. Project Page
Pennington, Deana D. 2007. Exploratory modeling of forest disturbance scenarios in central Oregon using computational experiments in GIS. Ecological Informatics. Vol: 2(4). Pages 387-403. Project Page
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Pennington, Deana D. Collaborative research teams as dynamic distributed cognitive systems. Computer Supported Cooperative Work. Project Page
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Pennington, Deana D.; Madin, Joshua S.; Villa, Ferdinando; Athanasiadis, I. 2007. Computer-supported collaborative knowledge modeling in ecology. Edited by Noy, N.; Alani,H.; Stumme, G.; Mika,P.; Sure, Y.; Vrandecic, D.. Proceedings: Workshop on Social and Collaborative Construction of Structured Knowledge, 16th International World Wide Web Conference (WWW2007), CEUR Workshop Proceedings. Banff, Canada. Project Page
Pennington, Deana D.; Michener, William K. 2005. The EcoGrid and the Kepler workflow system: a new platform for conducting ecological analyses. ESA Bulletin (Emerging Technologies). Vol: 86(3). Pages 169-176. Project Page
Pennington, Deana D.; Michener, William K.; Katz, Samantha; Downey, Laura; Schildhauer, Mark P. 2008. Transforming scientists through technical education - a view from the trenches. Computing in Science and Engineering. Vol: 10(5). Pages 28-33. Project Page
Perry, Joe N.; Liebhold, Andrew M.; Rosenberg, Michael S.; Dungan, Jennifer L.; Miriti, Maria; Jakomulska, Anna; Citron-Pousty, Steven I. 2002. Illustrations and guidelines for selecting statistical methods for quantifying spatial pattern in ecological data. Ecography. Vol: 25. Pages 578-600. (Abstract) Project Page
Pershing, Andrew J.; Greene, Charles H.; Planque, B.; Fromentin, J. 2004. The influence of climate variability on North Atlantic zooplankton populations. Edited by Stenseth, N. C.; Ottersen, G.; Hurrell, J.; Belgrano, A.. Ecological Effects of Climate Variations in the North Atlantic. Oxford University Press. Pages 59-69. Project Page
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Peters, Shanan E.; Heim, Noel A. In Press. The geologic completeness of paleontological sampling in North America. Paleobiology. Project Page
Peterson, A. Townsend. 2003. Predicting the geography of species' invasions via ecological niche modeling. The Quarterly Review of Biology. Vol: 78(4). The University of Chicago Press. Pages 419-433. Project Page
Peterson, A. Townsend. 2003. Projected climate change effects on Rocky Mountain and Great Plains birds: Generalities of biodiversity consequences. Global Change Biology. Vol: 9. Pages 647-655. Project Page
Peterson, A. Townsend. 2004. Climate change effects on species and biodiversity. Edited by Ragaini, R.. International Seminar on Nuclear War and Planetary Emergencies, 30th Session. World Scientific, New Jersey. Pages 59-68. Project Page
Peterson, A. Townsend. 2005. Kansas gap analysis: The importance of validating distributional models before using them. Southwestern Naturalist. Vol: 50(2). Southwestern Association of Naturalists. Pages 230-236. Project Page
Peterson, A. Townsend. 2006. Uses and requirements of ecological niche models and related distributional models. Biodiversity Informatics. Vol: 3. Pages 59-72. Project Page
Peterson, A. Townsend; Bauer, John T.; Mills, James N. 2004. Ecological and geographic distribution of filovirus disease. Emerging Infectious Diseases. Vol: 10(1). Pages 40-47. Project Page
Peterson, A. Townsend; Holt, Robert D. 2003. Niche differentiation in Mexican birds: Using point occurrences to detect ecological innovation. Ecology Letters. Vol: 6(8). Pages 774-782. Project Page
Peterson, A. Townsend; Kluza, D. A. 2003. New distributional modeling approaches for gap analysis. Animal Conservation. Vol: 6. The Zoological Society of London. Pages 47-54. Project Page
Peterson, A. Townsend; Komar, Nicholas; Komar, Oliver; Navarro-Sigenza, A. G.; Robbins, Mark B.; Martinez-Meyer, Enrique. 2004. West nile virus in the new world: Potential impacts on bird species. Bird Conservation International. Vol: 14. Pages 215-232. Project Page
Peterson, A. Townsend; Martinez-Meyer, Enrique; Gonzlez-Salazar, C.; Hall, Peter W. 2004. Modeled climate change effects on distributions of Canadian butterfly species. Canadian Journal of Zoology. Vol: 82. Pages 851-858. Project Page
Peterson, A. Townsend; Navarro-Sigenza, A. G.; Pereira, Ricardo S. 2004. Detecting errors in biodiversity data based on collectors' itineraries. Bulletin of the British Ornithologists' Club. Vol: 124(2). Pages 143-151. Project Page
Peterson, A. Townsend; Papes, M.; Kluza, D. A. 2003. Predicting the potential invasive distributions of four alien plant species in North America. Weed Science. Vol: 51. Pages 863-868. Project Page
Peterson, A. Townsend; Pereira, Ricardo S.; Hargrove, William W. 2004. Potential geographic distribution of Anoplophora glabripennis (Coleoptera: Cerambycidae) in North America. American Midland Naturalist. Vol: 151. Pages 170-178. Project Page
Peterson, A. Townsend; Pereira, Ricardo S.; Kluza, D. A. 2003. Assessment of invasive potential of Homalodisca coagulata in western North America and South America. Biota Neotropica. (Online version)Project Page
Peterson, A. Townsend; Pereira, Ricardo S.; de Camargo Neves, Vera Lucia Fonseca. 2004. Using epidemiological survey data to infer geographic distributions of leishmania vector species. Revista da Sociedade Brasileira de Medicina Tropical. Vol: 37. Pages 10-14. Project Page
Peterson, A. Townsend; Shaw, J. J. 2003. Lutzomyia vectors for cutaneous leishmaniasis in southern Brazil: Ecological niche models, predicted geographic distributions, and climate change effects. International Journal of Parasitology. Vol: 33. Pages 919-931. Project Page
Peterson, A. Townsend; Tian, H.; Martinez-Meyer, Enrique; Huntley, Brian; Soberon Mainero, Jorge; Sanchez-Cordero, V. 2005. Modeling distributional shifts of individual species and biomes. Biodiversity and Climate Change. Yale University. New Haven, CT. Project Page
Peterson, A. Townsend; Vieglais, David A.; Andreasen, J. 2003. Migratory birds modeled as critical transport agents for west nile virus in North America. Vector-Borne and Zoonotic Diseases. Vol: 3(1). Pages 27-37. Project Page
Peterson, A. Townsend; Vieglais, David A.; Navarro-Sigenza, A. G.; Silva, M. 2003. A global distributed biodiversity information network: Building the world museum. Bulletin of the British Ornithologists' Club. Vol: 123A. Pages 186-196. Project Page
Peterson, Charles H.; Jackson, Jeremy B.C.; Kirby, Michael X.; Lenihan, Hunter S.; Bourque, Bruce J.; Bradbury, Roger; Cooke, Richard G.; Kidwell, Susan. 2001. Response to: Factors in the decline of coastal ecosystems. Science. Vol: 293. Pages 1590-1591. Project Page
Peterson, Garry. 2000. Political Ecology and ecological resilience: An integration of human and ecological dynamics. Ecological Economics. Vol: 35. Pages 323-336. Project Page
Peterson, Garry. 2001. Multiple stable states and landscape resilience. Edited by Gergel, S. E.; Turner, M. G.. Learning Landscape Ecology: A Practical Guide to Concepts and Techniques. Springer-Verlag. New York. Pages 166-186. (Online version)Project Page
Peterson, Garry. 2002. Contagious disturbance, ecological memory, and the emergence of landscape pattern. Ecosystems. Vol: 5(4). Pages 329-338. Project Page
Peterson, Garry. 2002. Using ecological dynamics to move towards an adaptive architecture. Edited by Kibert, C.; Sendzimir, J.; Guy, G.B.. Construction Ecology: Nature as the Basis for Green Buildings. Spon Press. London. Pages 127-150. Project Page
Peterson, Garry; Cummingham, S.; Deutsch, L.; Erickson, Jon D.; Quinlan, Allyson; Raez-Luna, E.; Tinch, R.; Troell, M.; Woodbury, P.; Zens, S. 2000. The risks and benefits of genetically modified crops: A multidisciplinary perspective. Conservation Ecology. Vol: 4. Pages 13. (Online version)Project Page
Peterson, Garry; Heemskerk, Marieke. 2001. Deforestation and forest regeneration following small-scale gold mining in the Amazon: The case of Suriname. Environmental Conservation. Vol: 28(2). Pages 117-126. Project Page
Pfaff, Alexander; Kerr, Suzi; Hughes, R. Flint; Liu, Shuguang; Sanchez, Arturo; Schimel, David W.; Tosi, Joseph; Watson, Vicente. 2000. The Kyoto Protocol and payments for tropical forest: An interdisciplinary method for estimating carbon-offset supply and increasing the feasibility of a carbon market under the CDM. Ecological Economics. Vol: 35. Pages 203. Project Page
Pfaff, Alexander; Kerr, Suzi; Lipper, Leslie; Cavatassi, Romina; Davis, Benjamin; Hendy, Joanna; Sanchez-Azofeifa, G. A. 2007. Will buying tropical forest carbon benefit the poor? Evidence from Costa Rica. Land Use Policy. Vol: 24. Pages 600-610. Project Page
Pfaff, Alexander; Sanchez-Azofeifa, G. A. 2004. Deforestation pressure and biological reserve planning: A conceptual approach and an illustrative application for Costa Rica. Resource and Energy Economics. Vol: 26. Pages 237-254. Project Page
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Pham, Samantha V.; Leavitt, Peter R.; McGowan, Suzanne; Wissel, B.; Wassenaar, Leonard I. 2009. Spatial and temporal variability of prairie lake hydrology as revealed using stable isotopes of hydrogen and oxygen. Limnology and Oceanography. Vol: 54(1). Pages 101-118. Project Page
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Philpott, Stacy; Arendt, W.; Armbrecht, I.; Dietsch, T.; Gordon, C.; Greenberg, R.; Soto-Pinto, Lorena; Tejada-Cruz, C.; Williams-Linera, G.; Valenzuela, J. 2008. Biodiversity loss in Latin American coffee landscapes: Review of the evidence on ants, birds, and trees. Conservation Biology. Vol: 22(5). Pages 1093-1105. Project Page
Philpott, Stacy; Soong, Oliver; Lowenstein, Jacob; Pulido, Astrid; Lopez, Diego Tobar; Flynn, Dan; De Clerck, Fabrice. In press. Functional richness and ecosystem services: Bird predation on arthropods in tropical agroecosystems. Ecological Applications. Vol: 19(7). Pages 1858-1867. Project Page
Philpott, Stacy; Soong, Oliver; Lowenstein, Jacob; Pulido, Astrid; Lopez, Diego Tobar; Flynn, Dan; De Clerck, Fabrice. 2009. Functional richness and ecosystem services: Bird predation on arthropods in tropical agroecosystems. Ecological Applications. Vol: 19(7). Ecological Society of America. Pages 1858-1867. Project Page
Pietri, Diana; Christie, Patrick J.; Pollnac, Richard; Diaz, Roxie; Sabonsolin, Agnes. 2009. Information diffusion in two marine protected area networks in the central Visayas region, Philippines. Coastal Management. Vol: 37(3-4). Pages 331 - 348. Project Page
Pincetl, Stephanie. 2007. From the sanitary city of the twentieth century to the sustainable city of the twenty-first. PLACES. Vol: 19(1). Pages 59-61. Project Page
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Pollnac, Richard; Christie, Patrick J. 2009. Introduction: Scaling up to ecosystem-based management?case studies and comparative analysis. Coastal Management. Vol: 37(3-4). Pages 215 - 218. Project Page
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Possingham, Hugh P.; Ball, Ian; Andelman, Sandy J. 2000. Mathematical methods for identifying representative reserve networks. Edited by Ferson, S.; Burgman, M.. Quantitative Methods for Conservation Biology. Springer-Verlag. New York. Pages 291-306. Project Page
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